Basile Lab

Useful Links

About Wyoming and the region:

WY-287 Webcam 

CO Webcams

Wyoming Travel Information Map

National Weather Service/Northern Rockies Sector

Wyoming fly fishing: fly patterns

 

Libraries and facilities:

UW - Libraries Home

SciFinder & Web of Knowledge

UW Molecular Cellular Life Sciences

Macromolecular Analysis Core

CSU Libraries

CSU Proteomics and Metabolomics Facility

UW Macromolecular Core Facility (MAC): MALDI-ToF/ToF-MS (5800 ^TM, Sciex)

 

Journals:

ACS Publications & Resources

Analytical Biochemistry

Analytical Chemistry (ACS Publications)

BMC Bioinformatics

Chemical Reviews

Energy & Fuels

Environmental Science & Technology

Journal of Proteome Research

Journal of Analytical and Applied Pyrolysis

Journal of Chemical Education Online

Journal of the American Society for Mass Spectrometry 

Journal of Chromatography A      

Journal of Chromatography B: Biomedical sciences and applications

Journal of Mass Spectrometry

Nature Methods

Rapid Commun. in Mass Spectrometry

 

Research resources and instruments:

Planet Orbitrap (Thermo Scientific Library)

Thermo Scientific Knowledge Base: Mass Spectrometry & Chromatography

IonSource

 

Chemistry:

NIST Chemistry WebBook

Chem-industry...search the chemical world

PubChem Compound Search:

PubChem Substance PubChem Compound PubChem BioAssay

(enter empirical formula,  e.g., "C9H8O4" or the compound name,  e.g., "aspirin")

 

EPA Chemistry Dashboard

 

Metabolomics and lipidomics:

MSDIAL: software for metabolomics and lipidomics, tutorials

LIPID MAPS: a comprehensive resource for lipidomics; lipidomics tutorials

The Lipid Library

LIPID-MAPS: Lipidomics tools & database

Introduction to steroids

Metabolome XCMS at Scripps

 

Proteomics and Metaproteomics:

Metaproteomics initiative

NCBI Introduction to Mol Bio Information Resources

NCBI microbial genomes

PubMed

ExPASy Bioinformatics Resource Portal

UniProt

MaxQuant

Systems Biology tool kit

Seattle Proteome Center (SPC): resources

Matrix Science - Home

ProteinProspector

ABRF Delta Mass Database

 

SILAC (.org)

 

MS imaging:

MALDI MS imaging (MALDI MSi)

METASPACE metabolite annotation of imaging mass spectrometry data

 

Chromatography:

Chromatography calculator

LC learning site

SPME Application Notes (Supelco)

Supelco Literature & Resources

GC ,  LC ,  MS standards

 

Research tools:

Statistics

All about electronic circuits

Science News

BoxPlotR...generate customized box plots with your data

Cool Tools (kk.org)

 

Downloads:

Molecular weight/isotopic pattern etc calculator by Matthew Monroe

MS-related software at:  www.ms-utils.org/wiki/

Excell spreadsheet resources at " Excellaneous" (courtesy of Prof. Robert de Levie)

 

Laboratory supplies:

Rocket Seals (buy any O-ring here)

Polymicro Technologies Products and Technologies Capillary Tubing

Scientific Instrument Services (SIS)

Supelco Home

SPME Application Notes (Supelco)

Supelco Literature & Resources

GC ,  LC ,  MS standards

 

Scientific societies:

American Chemical Society - The world's largest scientific society

American Society for Mass Spectrometry

 

Funding:

NSF   NSF FastLane

NSF award search

Grants.gov

DTRA

NIH Commons

UW EPSCoR office

UW Research office (proposal development)

 

Food websites:

NY Times Cooking

David Lebovitz

Mark Bittman (good food philosophy)