ARCC Technical Documentation Index
The Advanced Research Computing Center is the primary research computing center at the University of Wyoming. This wiki is intended to provide user-focused, detailed technical documentation and instructions for how to utilize research computing resources available to the University of Wyoming research community. The General ARCC Service Documentation Section on the left contains documentation with overviews on all of our resources, and how to use them. The ARCC Cluster Documentation section on the right contains documentation and how-tos associated with ARCC cluster(s) i.e., Medicinebow. Please contact arcc-help@uwyo.edu if you notice any of our Wiki documentation is outdated, incorrect or you’re unable to find what you need.
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ARCC System & Services Overviews |
ARCC HPC System Overview |
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New to ARCC? ARCC Get Started Guide |
New to HPC? ARCC Guide to HPC |
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ARCC Primary Resources & Services |
Medicinebow Related Documentation |
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Medicinebow: ARCC's Primary Cluster Alcova: Traditional Research Data Storage Pahfinder: Cloud-like S3 Bucket Storage User Support: Getting Help CRST: Computational Research Software Team Specialized Services |
Medicinebow: An Overview of ARCC's Primary Cluster Filesystem Structure Software List PBS To Slurm: Commannd Translation Cheatsheet Get Familiar with Linux Command Line |
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Accounts, Access & Configuration |
Logging into the Cluster |
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Getting Access to ARCC Services Initial Account Configuration Non-UW (ARCC-Only) Account Setup Accessing Your ARCC Project & Resources Configure MobaXTerm to Access Medbow(Windows Specific) |
Log into Medicinebow from the web (UWYO Accounts) Log into Medicinebow from the web (non-UWYO Accounts) Configure SSH Logins from your personal device
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Methods to Access, Move & Manage ARCC Hosted Data |
OnDemand: Run Graphical Medbow Apps from your Browser |
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Mapping/Mounting as a Network Drive - SMB/CIFS (Alcova) Using Globus Online (Alcova/Medicinebow/Pathfinder) Using Cloudberry (Pathfinder) Using Cyberduck (Alcova/Medicinebow/Pathfinder) Using RClon( Medicinebow/Pathfinder/Alcova) |
Run Interactive Graphical Jobs with OnDemand Launch R Studio from OnDemand Using Jupyter Using Matlab VS Code Server |
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Top Referenced Pages |
Running Jobs & The SLURM Job Scheduler |
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Getting Started with ARCC Known Issues ARCC Facilities Statement Citing ARCC |
Submit Batch Jobs from Command Line Running Jobs: Batch Script Basics and Common Term Run Interactive Jobs from Command Line Job Output & Logging Query the HPC System & Job Information |
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Online Training Materials |
Data and Directories on the Cluster |
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Intro to Linux Command Line Intro to an ARCC HPC Linux Command-Line Text Editors Intro to Data Management Intro to Conda: creating Environments Intro to Medicinebow: OnDemand - HPC Access from a Browser Using Python, Pip & Conda |
Common ARCC Cluster Directories Linux FileSystem Structure and Navigation Get Access and Move your Files Using SCP and SFTP Use RSync / RClone
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Software |
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Investments |
Using Preinstalled Software |
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Investment Allocations Node Purchase Estimates |
What's Already Installed? Load Software: Using The Module System (LMOD) Old Wiki Application Documentation Index
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Specialized Systems & Services |
Installing Software |
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External HPC Support - Pending Gitlab Globus Linux Client Support - Pending Gracehopper Nodes Colo-Systems - Pending Sage-3 - Pending |
With Environments & Kernels Installing/Running from Binary Conda Environments Importing Jupyter Kernels With Other Methods Compiling Software Software Imports/Exports Between Systems - Pending Containers (AKA:Apptainer) - Pending Common Problems - Pending |
The University of Wyoming has earned its Research Level 1 (R1) status from the Carnegie Classification of Institutions of Higher Education, placing Wyoming's only four-year university with the top research universities in the United States.